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jaligner.sourceforge.net

Java implementation of the dynamic programming algorithm Smith-Waterman for biological local pairwise sequence alignment

Description: JAligner is an open source Java implementation of the Smith-Waterman algorithm with Gotoh's improvement for biological local pairwise sequence alignment using the affine gap penalty model.

Keywords: jaligner pairwise local java sequence alignment affine gap open source smith-waterman algorithm

 
 
 

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